| 1966 | Diddy Wah DiddyVinylePossédé | 4 |
| 1967 | Safe As MilkVinyle, CD, Cassette, DisquePossédé | 79 |
| 1968 | Strictly PersonalVinyle, CD, Cassette, DisquePossédé | 33 |
| 1968 | Sure 'Nuff 'N Yes I DoVinylePossédé | 7 |
| 1968 | Yellow Brick RoadVinylePossédé | 5 |
| 1968 | MoonchildVinyle, DisquePossédé | 4 |
| 1969 | Trout Mask ReplicaVinyle, CD, Cassette, DisquePossédé | 69 |
| 1969 | Plastic Factory / Where There's WomanVinylePossédé | 3 |
| 1970 | Lick My Decals Off, BabyVinyle, CD, Cassette, DisquePossédé | 42 |
| 1970 | Pachuco CadaverVinylePossédé | 2 |
| 1971 | Mirror ManVinyle, CD, Cassette, DisquePossédé | 27 |
| 1972 | Too Much TimeVinylePossédé | 6 |
| 1972 | Double Dynamite: The Spotlight Kid / Clear SpotVinyle, CDPossédé | 5 |
| 1974 | Unconditionally GuaranteedVinyle, CD, Cassette, DisquePossédé | 41 |
| 1974 | Bluejeans & MoonbeamsVinyle, CD, Cassette, DisquePossédé | 28 |
| 1974 | Upon The My-O-MyVinylePossédé | 8 |
| 1976 | 2 Originals Of Captain BeefheartVinylePossédé | 7 |
| 1977 | The File SeriesVinyle, CassettePossédé | 5 |
| 1978 | Shiny Beast (Bat Chain Puller)Vinyle, CD, Cassette, DisquePossédé | 29 |
| 1978 | Easy TeethVinyle, CDPossédé | 3 |
| 1979 | Live At My Fathers Place Vol. IVinyle, CDPossédé | 7 |
| 1980 | Doc At The Radar StationVinyle, CD, CassettePossédé | 27 |
| 1982 | Top SecretVinyle, CassettePossédé | 9 |
| 1982 | Light Reflected Off The Oceands Of The MoonVinyle, DisquePossédé | 3 |
| 1983 | Music In Sea MinorVinyle, CassettePossédé | 2 |
| 1984 | The Legendary A&M SessionsVinyle, CD, CassettePossédé | 9 |
| 1988 | Safe As Milk / Mirror ManVinyle, CD, Cassette, DisquePossédé | 4 |
| 1989 | The Lives And Times Of Captain Beefheart - Somebody In My HomeVinyle, CDPossédé | 4 |
| 1991 | Rare Beefheart / Vintage ZappaCDPossédé | 1 |
| 1993 | Stand Up To Be DiscontinuedCDPossédé | 1 |
| 1996 | Zig Zag Wanderer - The Best Of The Buddah YearsCDPossédé | 2 |
| 1999 | The Mirror Man SessionsVinyle, CDPossédé | 10 |
| 1999 | Grow Fins Vol. II: Trout Mask House SessionsVinyle, CDPossédé | 8 |
| 1999 | The Dust Blows Forward (An Anthology)CD, CassettePossédé | 2 |
| 2003 | Hot Head - Introducing...Captain BeefheartCDPossédé | 3 |
| 2003 | Railroadism (Captain Beefheart And His Magic Bands Live In The USA 72-81)CDPossédé | 1 |
| 2004 | Magneticism: Captain Beefheart And His Magic Bands Live In The UK/USA 72-81Vinyle, CDPossédé | 2 |
| 2005 | Live 'N' RareCDPossédé | 2 |
| 2005 | Prime Quality BeefCDPossédé | 2 |
| 2006 | Live London '74CDPossédé | 3 |
| 2006 | The Buddah YearsCDPossédé | 2 |
| 2007 | Dust SuckerVinylePossédé | 2 |
| 2007 | Live At Bickershaw Festival - North West England 1972CDPossédé | 1 |
| 2008 | ElectricityCDPossédé | 2 |
| 2011 | Translucent Fresnel Live 72/73 - The Nan True's Hole Tapes - Vol. 1Vinyle, CDPossédé | 2 |
| 2013 | Frank Freeman's Dance Club - And Other RaritiesVinylePossédé | 3 |
| 2013 | The Rarest Previously Unreleased 1970s Live And Studio TracksVinylePossédé | 2 |
| 2014 | Live 1966-67Vinyle, CDPossédé | 4 |
| 2014 | Somewhere Over DetroitVinyle, CDPossédé | 3 |
| 2014 | Somewhere Over ParisVinyle, CDPossédé | 3 |
| 2015 | Live In Kansas City, 1974Vinyle, CDPossédé | 4 |
| 2016 | Live At Knebworth Park Saturday 5th July, 1975VinylePossédé | 1 |
| 2019 | Magneticism II - The Best Of Captain Beefheart & His Magic Bands Live In The USA 1966-81VinylePossédé | 1 |
| 2024 | Now PlayingVinylePossédé | 2 |
The Spotlight KidVinyle, CD, Cassette, DisquePossédé
Clear SpotVinyle, CD, Cassette, DisquePossédé
Ice Cream For CrowVinyle, CD, Cassette, DisquePossédé
Bongo FuryVinyle, CDPossédé
Full Moon in CowtownCDPossédé
Live at Knebworth ParkCDPossédé
Abba ZabaVinylePossédé
The Best BeefheartCD, CassettePossédé
I May Be Hungry But I Sure Ain't Weird - The Alternate Captain BeefheartCDPossédé
A Carrot Is As Close As A Rabbit Gets To A DiamondCDPossédé
The Spotlight Kid, Outtakes 1971-1972CDPossédé
Sun Zoom Spark: 1970 to 1972Vinyle, CDPossédé
Pearls Before Swine Ice Cream for CrowsCDPossédé